image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 161-180 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
Q6UXQ4C2orf66Uncharacterized protein C2orf66Chromosome-2Uncharacterized protein C2orf66
A6NI15MSGN1Mesogenin-1Chromosome-2Mesogenin-1
Q7RTX9SLC16A14Monocarboxylate transporter 14Chromosome-2Monocarboxylate transporter 14
Q8IXF9AQP12AAquaporin-12AChromosome-2Aquaporin-12A
Q96PD6MOGAT12-acylglycerol O-acyltransferase 1Chromosome-22-acylglycerol O-acyltransferase 1
Q6PIS1SLC23A3Solute carrier family 23 member 3Chromosome-2Solute carrier family 23 member 3
Q8TAX0OSR1Protein odd-skipped-related 1Chromosome-2Protein odd-skipped-related 1
Q13304GPR17Uracil nucleotide/cysteinyl leukotriene receptorChromosome-2Uracil nucleotide/cysteinyl leukotriene receptor
Q08AI6SLC38A11Putative sodium-coupled neutral amino acid transporter 11Chromosome-2Putative sodium-coupled neutral amino acid transporter 11
Q0D2K2KLHL30Kelch-like protein 30Chromosome-2Kelch-like protein 30
O95156NXPH2Neurexophilin-2Chromosome-2Neurexophilin-2
P48201ATP5G3ATP synthase F(0) complex subunit C3, mitochondrialChromosome-2ATP synthase F(0) complex subunit C3, mitochondrial
Q8N1E2LYG1Lysozyme g-like protein 1Chromosome-2Lysozyme g-like protein 1
Q05215EGR4Early growth response protein 4Chromosome-2Early growth response protein 4
P0CW19LIMS3LIM and senescent cell antigen-like-containing domain protein 3Chromosome-2LIM and senescent cell antigen-like-containing domain protein 3
Q6XYB7LBX2Transcription factor LBX2Chromosome-2Transcription factor LBX2
Q4G0M1FAM132BErythroferroneChromosome-2Erythroferrone
Q53R12TM4SF20Transmembrane 4 L6 family member 20Chromosome-2Transmembrane 4 L6 family member 20
P0CG36CFC1BCryptic family protein 1BChromosome-2Cryptic family protein 1B
P47872SCTRSecretin receptorChromosome-2Secretin receptor

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

Write to us