image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 161-180 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
Q2M2E5C5orf64Uncharacterized protein C5orf64Chromosome-5Uncharacterized protein C5orf64
Q6UXA7C6orf15Uncharacterized protein C6orf15Chromosome-6Uncharacterized protein C6orf15
Q8N319C6orf223Uncharacterized protein C6orf223Chromosome-6Uncharacterized protein C6orf223
Q9UBA6C6orf48Protein G8Chromosome-6Protein G8
Q5T4I8C6orf52Putative uncharacterized protein C6orf52Chromosome-6Putative uncharacterized protein C6orf52
Q8N9H6C8orf31Uncharacterized protein C8orf31Chromosome-8Uncharacterized protein C8orf31
Q49A92C8orf34Uncharacterized protein C8orf34Chromosome-8Uncharacterized protein C8orf34
Q8TAG6C8orf46Uncharacterized protein C8orf46Chromosome-8Uncharacterized protein C8orf46
Q8N7X2C9orf173Uncharacterized protein C9orf173Chromosome-9Uncharacterized protein C9orf173
Q5SZB4C9orf50Uncharacterized protein C9orf50Chromosome-9Uncharacterized protein C9orf50
Q5T8R8C9orf66Uncharacterized protein C9orf66Chromosome-9Uncharacterized protein C9orf66
Q5VXU9C9orf84Uncharacterized protein C9orf84Chromosome-9Uncharacterized protein C9orf84
A6NGG3C9orf92Putative uncharacterized protein C9orf92Chromosome-9Putative uncharacterized protein C9orf92
Q9UBN1CACNG4Voltage-dependent calcium channel gamma-4 subunitChromosome-17Voltage-dependent calcium channel gamma-4 subunit
Q9UF02CACNG5Voltage-dependent calcium channel gamma-5 subunitChromosome-17Voltage-dependent calcium channel gamma-5 subunit
Q9BXT2CACNG6Voltage-dependent calcium channel gamma-6 subunitChromosome-19Voltage-dependent calcium channel gamma-6 subunit
P62955CACNG7Voltage-dependent calcium channel gamma-7 subunitChromosome-19Voltage-dependent calcium channel gamma-7 subunit
Q86XJ0CALHM3Calcium homeostasis modulator protein 3Chromosome-10Calcium homeostasis modulator protein 3
Q9BXU9CALN1Calcium-binding protein 8Chromosome-7Calcium-binding protein 8
Q96S95CAMK2N2Calcium/calmodulin-dependent protein kinase II inhibitor 2Chromosome-3Calcium/calmodulin-dependent protein kinase II inhibitor 2

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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