image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 161-180 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
P0CF75EBLN1Endogenous Bornavirus-like nucleoprotein 1Chromosome-10Endogenous Bornavirus-like nucleoprotein 1
O43812DUX1Double homeobox protein 1Chromosome-10Double homeobox protein 1
A6NNW6ENO4Enolase-like protein ENO4Chromosome-10Enolase-like protein ENO4
Q8IVF1NUTM2ANUT family member 2AChromosome-10NUT family member 2A
O94844RHOBTB1Rho-related BTB domain-containing protein 1Chromosome-10Rho-related BTB domain-containing protein 1
Q9GZQ6NPFFR1Neuropeptide FF receptor 1Chromosome-10Neuropeptide FF receptor 1
Q8TF27AGAP11Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11Chromosome-10Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11
O76050NEURL1E3 ubiquitin-protein ligase NEURL1Chromosome-10E3 ubiquitin-protein ligase NEURL1
Q8N9B8RASGEF1ARas-GEF domain-containing family member 1AChromosome-10Ras-GEF domain-containing family member 1A
Q93098WNT8BProtein Wnt-8bChromosome-10Protein Wnt-8b
A6NF34ANTXRLAnthrax toxin receptor-likeChromosome-10Anthrax toxin receptor-like
P0C0P6NPSNeuropeptide SChromosome-10Neuropeptide S
O43174CYP26A1Cytochrome P450 26A1Chromosome-10Cytochrome P450 26A1
Q96M53TBATAProtein TBATAChromosome-10Protein TBATA
B1AL46NUTM2ENUT family member 2EChromosome-10NUT family member 2E
Q9NZ38IDI2-AS1Uncharacterized protein IDI2-AS1Chromosome-10Uncharacterized protein IDI2-AS1
Q5VXI9LIPNLipase member NChromosome-10Lipase member N
Q8N119MMP21Matrix metalloproteinase-21Chromosome-10Matrix metalloproteinase-21
Q6DHV5CC2D2BProtein CC2D2BChromosome-10Protein CC2D2B
Q6XLA1CASC2Protein CASC2, isoform 3Chromosome-10Protein CASC2, isoform 3

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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