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The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.

MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.

We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!


Showing 141-160 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
Q6RUI8C19orf48Uncharacterized protein C19orf48Chromosome-19Uncharacterized protein C19orf48
Q86UF4C1orf110Coiled-coil domain-containing protein C1orf110Chromosome-1Coiled-coil domain-containing protein C1orf110
Q5JVX7C1orf141Uncharacterized protein C1orf141Chromosome-1Uncharacterized protein C1orf141
Q13536C1orf61Protein CROC-4Chromosome-1Protein CROC-4
Q8NEQ6C1orf64Uncharacterized protein C1orf64Chromosome-1Uncharacterized protein C1orf64
Q96NR2C20orf166-AS1Putative uncharacterized protein C20orf166-AS1Chromosome-20Putative uncharacterized protein C20orf166-AS1
Q8NBC4C20orf203Uncharacterized protein C20orf203Chromosome-20Uncharacterized protein C20orf203
P58505C21orf58Uncharacterized protein C21orf58Chromosome-21Uncharacterized protein C21orf58
Q6IC83C22orf42Uncharacterized protein C22orf42Chromosome-22Uncharacterized protein C22orf42
Q8NCU7C2CD4AC2 calcium-dependent domain-containing protein 4AChromosome-15C2 calcium-dependent domain-containing protein 4A
Q6UXQ4C2orf66Uncharacterized protein C2orf66Chromosome-2Uncharacterized protein C2orf66
Q9UK00C3orf18Uncharacterized protein C3orf18Chromosome-3Uncharacterized protein C3orf18
Q6ZVT6C3orf67Uncharacterized protein C3orf67Chromosome-3Uncharacterized protein C3orf67
Q53FE4C4orf17Uncharacterized protein C4orf17Chromosome-4Uncharacterized protein C4orf17
Q6V702C4orf22Uncharacterized protein C4orf22Chromosome-4Uncharacterized protein C4orf22
A7E2U8C4orf47UPF0602 protein C4orf47Chromosome-4UPF0602 protein C4orf47
C9J302C4orf51Uncharacterized protein C4orf51Chromosome-4Uncharacterized protein C4orf51
Q8NAS9C5orf17Uncharacterized protein C5orf17Chromosome-5Uncharacterized protein C5orf17
Q8N8D9C5orf56Uncharacterized protein C5orf56Chromosome-5Uncharacterized protein C5orf56

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.


Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia

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