image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 141-160 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
Q5T5M9CCNJCyclin-JChromosome-10Cyclin-J
Q70YC4ZNF365TalaninChromosome-10Talanin
Q6V0L0CYP26C1Cytochrome P450 26C1Chromosome-10Cytochrome P450 26C1
P0CF75EBLN1Endogenous Bornavirus-like nucleoprotein 1Chromosome-10Endogenous Bornavirus-like nucleoprotein 1
Q96KN9GJD4Gap junction delta-4 proteinChromosome-10Gap junction delta-4 protein
Q8IVF1NUTM2ANUT family member 2AChromosome-10NUT family member 2A
Q8TEF2C10orf105Uncharacterized protein C10orf105Chromosome-10Uncharacterized protein C10orf105
A6NF34ANTXRLAnthrax toxin receptor-likeChromosome-10Anthrax toxin receptor-like
B1AL46NUTM2ENUT family member 2EChromosome-10NUT family member 2E
O75474FRAT2GSK-3-binding protein FRAT2Chromosome-10GSK-3-binding protein FRAT2
Q8N6V4C10orf53UPF0728 protein C10orf53Chromosome-10UPF0728 protein C10orf53
Q8N456LRRC18Leucine-rich repeat-containing protein 18Chromosome-10Leucine-rich repeat-containing protein 18
Q6DHV5CC2D2BProtein CC2D2BChromosome-10Protein CC2D2B
A6NNL0NUTM2BNUT family member 2BChromosome-10NUT family member 2B
Q16572SLC18A3Vesicular acetylcholine transporterChromosome-10Vesicular acetylcholine transporter
P0C0P6NPSNeuropeptide SChromosome-10Neuropeptide S
Q6UWQ5LYZL1Lysozyme-like protein 1Chromosome-10Lysozyme-like protein 1
Q93098WNT8BProtein Wnt-8bChromosome-10Protein Wnt-8b
P59646FXYD4FXYD domain-containing ion transport regulator 4Chromosome-10FXYD domain-containing ion transport regulator 4
Q5BIV9SPRNShadow of prion proteinChromosome-10Shadow of prion protein

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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