image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 141-160 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
Q8NDW4ZNF248Zinc finger protein 248Chromosome-10Zinc finger protein 248
Q5T5M9CCNJCyclin-JChromosome-10Cyclin-J
Q8TEF2C10orf105Uncharacterized protein C10orf105Chromosome-10Uncharacterized protein C10orf105
Q5JSS6MEIG1Meiosis expressed gene 1 protein homologChromosome-10Meiosis expressed gene 1 protein homolog
Q96KN9GJD4Gap junction delta-4 proteinChromosome-10Gap junction delta-4 protein
Q6UWQ5LYZL1Lysozyme-like protein 1Chromosome-10Lysozyme-like protein 1
Q5VYY2LIPMLipase member MChromosome-10Lipase member M
Q32M84BTBD16BTB/POZ domain-containing protein 16Chromosome-10BTB/POZ domain-containing protein 16
Q5W0B7TMEM236Transmembrane protein 236Chromosome-10Transmembrane protein 236
Q9H943C10orf68Uncharacterized protein C10orf68Chromosome-10Uncharacterized protein C10orf68
Q86XJ0CALHM3Calcium homeostasis modulator protein 3Chromosome-10Calcium homeostasis modulator protein 3
Q5VYJ5MALRD1MAM and LDL-receptor class A domain-containing protein 1Chromosome-10MAM and LDL-receptor class A domain-containing protein 1
A6NMN3FAM170BPutative protein FAM170BChromosome-10Putative protein FAM170B
Q5VWI1TCERG1LTranscription elongation regulator 1-like proteinChromosome-10Transcription elongation regulator 1-like protein
Q16572SLC18A3Vesicular acetylcholine transporterChromosome-10Vesicular acetylcholine transporter
A6NNA5DRGXDorsal root ganglia homeobox proteinChromosome-10Dorsal root ganglia homeobox protein
Q86X67NUDT13Nucleoside diphosphate-linked moiety X motif 13Chromosome-10Nucleoside diphosphate-linked moiety X motif 13
A2RU54HMX2Homeobox protein HMX2Chromosome-10Homeobox protein HMX2
Q96PL2TECTBBeta-tectorinChromosome-10Beta-tectorin
A6NNL0NUTM2BNUT family member 2BChromosome-10NUT family member 2B

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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