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The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.

MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.

We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!


Showing 121-140 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
Q6UXE8BTNL3Butyrophilin-like protein 3Chromosome-5Butyrophilin-like protein 3
Q8TEF2C10orf105Uncharacterized protein C10orf105Chromosome-10Uncharacterized protein C10orf105
Q8IVU9C10orf107Uncharacterized protein C10orf107Chromosome-10Uncharacterized protein C10orf107
Q8N6V4C10orf53UPF0728 protein C10orf53Chromosome-10UPF0728 protein C10orf53
Q9H943C10orf68Uncharacterized protein C10orf68Chromosome-10Uncharacterized protein C10orf68
Q9H5F2C11orf1UPF0686 protein C11orf1Chromosome-11UPF0686 protein C11orf1
Q9P2W6C11orf21Uncharacterized protein C11orf21Chromosome-11Uncharacterized protein C11orf21
Q8WZ69C11orf40Putative uncharacterized protein C11orf40Chromosome-11Putative uncharacterized protein C11orf40
Q8IXP5C11orf53Uncharacterized protein C11orf53Chromosome-11Uncharacterized protein C11orf53
Q8NBR9C11orf72Uncharacterized protein C11orf72Chromosome-11Uncharacterized protein C11orf72
Q8N6T0C11orf80Uncharacterized protein C11orf80Chromosome-11Uncharacterized protein C11orf80
Q96LP6C12orf42Uncharacterized protein C12orf42Chromosome-12Uncharacterized protein C12orf42
Q8IXR9C12orf56Uncharacterized protein C12orf56Chromosome-12Uncharacterized protein C12orf56
Q9NPU4C14orf132Uncharacterized protein C14orf132Chromosome-14Uncharacterized protein C14orf132
Q52M58C14orf177Putative uncharacterized protein C14orf177Chromosome-14Putative uncharacterized protein C14orf177
Q32M92C15orf32Uncharacterized protein C15orf32Chromosome-15Uncharacterized protein C15orf32
Q8NAA6C15orf53Uncharacterized protein C15orf53Chromosome-15Uncharacterized protein C15orf53
Q9H693C16orf95Uncharacterized protein C16orf95Chromosome-16Uncharacterized protein C16orf95
A8MQB3C17orf51Uncharacterized protein C17orf51Chromosome-17Uncharacterized protein C17orf51
Q96KH6C18orf12Uncharacterized protein C18orf12Chromosome-18Uncharacterized protein C18orf12

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.


Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia

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