image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 101-120 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
Q68G75LEMD1LEM domain-containing protein 1Chromosome-1LEM domain-containing protein 1
Q5TGS1HES3Transcription factor HES-3Chromosome-1Transcription factor HES-3
Q5R387PLA2G2CPutative inactive group IIC secretory phospholipase A2Chromosome-1Putative inactive group IIC secretory phospholipase A2
Q8NGY3OR6K3Olfactory receptor 6K3Chromosome-1Olfactory receptor 6K3
Q5T751LCE1CLate cornified envelope protein 1CChromosome-1Late cornified envelope protein 1C
Q5JRS4OR10J3Olfactory receptor 10J3Chromosome-1Olfactory receptor 10J3
Q8NBF1GLIS1Zinc finger protein GLIS1Chromosome-1Zinc finger protein GLIS1
Q7Z5H4VN1R5Vomeronasal type-1 receptor 5Chromosome-1Vomeronasal type-1 receptor 5
Q7Z3T1OR2W3Olfactory receptor 2W3Chromosome-1Olfactory receptor 2W3
Q9Y2T5GPR52Probable G-protein coupled receptor 52Chromosome-1Probable G-protein coupled receptor 52
Q86UF4C1orf110Coiled-coil domain-containing protein C1orf110Chromosome-1Coiled-coil domain-containing protein C1orf110
Q9BYE3LCE3DLate cornified envelope protein 3DChromosome-1Late cornified envelope protein 3D
Q5TCM9LCE5ALate cornified envelope protein 5AChromosome-1Late cornified envelope protein 5A
Q5XKL5BTBD8BTB/POZ domain-containing protein 8Chromosome-1BTB/POZ domain-containing protein 8
Q5T754LCE1FLate cornified envelope protein 1FChromosome-1Late cornified envelope protein 1F
Q7RTX1TAS1R1Taste receptor type 1 member 1Chromosome-1Taste receptor type 1 member 1
O60478GPR137BIntegral membrane protein GPR137BChromosome-1Integral membrane protein GPR137B
Q8NG83OR2M3Olfactory receptor 2M3Chromosome-1Olfactory receptor 2M3
Q3BBW0NBPF9Neuroblastoma breakpoint family member 9Chromosome-1Neuroblastoma breakpoint family member 9
Q8WZ79DNASE2BDeoxyribonuclease-2-betaChromosome-1Deoxyribonuclease-2-beta

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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