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The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.

MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.

We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!


Showing 21-40 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
P29275ADORA2BAdenosine receptor A2bChromosome-17Adenosine receptor A2b
P0DMS8ADORA3Adenosine receptor A3Chromosome-1Adenosine receptor A3
P25100ADRA1DAlpha-1D adrenergic receptorChromosome-20Alpha-1D adrenergic receptor
P18825ADRA2CAlpha-2C adrenergic receptorChromosome-4Alpha-2C adrenergic receptor
Q8TF27AGAP11Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11Chromosome-10Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11
Q96P64AGAP4Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4Chromosome-10Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4
Q5VU57AGBL4Cytosolic carboxypeptidase 6Chromosome-1Cytosolic carboxypeptidase 6
Q5T1N1AKNAD1Protein AKNAD1Chromosome-1Protein AKNAD1
P48448ALDH3B2Aldehyde dehydrogenase family 3 member B2Chromosome-11Aldehyde dehydrogenase family 3 member B2
Q5BKT4ALG10Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferaseChromosome-12Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
Q6GMV1ALG1LPutative glycosyltransferase ALG1-likeChromosome-3Putative glycosyltransferase ALG1-like
Q8N6M5ALLCProbable allantoicaseChromosome-2Probable allantoicase
Q86TB3ALPK2Alpha-protein kinase 2Chromosome-18Alpha-protein kinase 2
Q99218AMELYAmelogenin, Y isoformChromosome-YAmelogenin, Y isoform
Q86WK7AMIGO3Amphoterin-induced protein 3Chromosome-3Amphoterin-induced protein 3
Q86XS5ANGPTL5Angiopoietin-related protein 5Chromosome-11Angiopoietin-related protein 5
Q7Z5J8ANKARAnkyrin and armadillo repeat-containing proteinChromosome-2Ankyrin and armadillo repeat-containing protein
Q495B1ANKDD1AAnkyrin repeat and death domain-containing protein 1AChromosome-15Ankyrin repeat and death domain-containing protein 1A
Q8N957ANKFN1Ankyrin repeat and fibronectin type-III domain-containing protein 1Chromosome-17Ankyrin repeat and fibronectin type-III domain-containing protein 1

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.


Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia

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