image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 201-220 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
P17030ZNF25Zinc finger protein 25Chromosome-10Zinc finger protein 25
O75474FRAT2GSK-3-binding protein FRAT2Chromosome-10GSK-3-binding protein FRAT2
Q8IVU9C10orf107Uncharacterized protein C10orf107Chromosome-10Uncharacterized protein C10orf107
Q96RB7OR5M11Olfactory receptor 5M11Chromosome-11Olfactory receptor 5M11
Q8NGM9OR8D4Olfactory receptor 8D4Chromosome-11Olfactory receptor 8D4
Q8NH49OR4X1Olfactory receptor 4X1Chromosome-11Olfactory receptor 4X1
Q9UKI9POU2F3POU domain, class 2, transcription factor 3Chromosome-11POU domain, class 2, transcription factor 3
Q9NRE1MMP26Matrix metalloproteinase-26Chromosome-11Matrix metalloproteinase-26
Q9H339OR51B5Olfactory receptor 51B5Chromosome-11Olfactory receptor 51B5
P52961ART1GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1Chromosome-11GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1
Q9Y5P0OR51B4Olfactory receptor 51B4Chromosome-11Olfactory receptor 51B4
Q9Y5P1OR51B2Olfactory receptor 51B2Chromosome-11Olfactory receptor 51B2
Q8NH72OR4C6Olfactory receptor 4C6Chromosome-11Olfactory receptor 4C6
Q96LB0MRGPRX3Mas-related G-protein coupled receptor member X3Chromosome-11Mas-related G-protein coupled receptor member X3
Q96E66LRTOMTLeucine-rich repeat-containing protein 51Chromosome-11Leucine-rich repeat-containing protein 51
Q3C1V8BSXBrain-specific homeobox protein homologChromosome-11Brain-specific homeobox protein homolog
Q96DS6MS4A6EMembrane-spanning 4-domains subfamily A member 6EChromosome-11Membrane-spanning 4-domains subfamily A member 6E
P08173CHRM4Muscarinic acetylcholine receptor M4Chromosome-11Muscarinic acetylcholine receptor M4
Q8NGJ8OR51S1Olfactory receptor 51S1Chromosome-11Olfactory receptor 51S1
Q6IEV9OR4C11Olfactory receptor 4C11Chromosome-11Olfactory receptor 4C11

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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