image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 201-220 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
Q8NG95OR7G3Olfactory receptor 7G3Chromosome-19Olfactory receptor 7G3
Q8NG98OR7D4Olfactory receptor 7D4Chromosome-19Olfactory receptor 7D4
Q9H0D2ZNF541Zinc finger protein 541Chromosome-19Zinc finger protein 541
Q8TDN7ACER1Alkaline ceramidase 1Chromosome-19Alkaline ceramidase 1
Q9Y4A9OR10H1Olfactory receptor 10H1Chromosome-19Olfactory receptor 10H1
O43345ZNF208Zinc finger protein 208Chromosome-19Zinc finger protein 208
Q6P3V2ZNF585AZinc finger protein 585AChromosome-19Zinc finger protein 585A
Q6UY09CEACAM20Carcinoembryonic antigen-related cell adhesion molecule 20Chromosome-19Carcinoembryonic antigen-related cell adhesion molecule 20
Q8N9Z0ZNF610Zinc finger protein 610Chromosome-19Zinc finger protein 610
Q8N823ZNF611Zinc finger protein 611Chromosome-19Zinc finger protein 611
Q6ZMY6WDR88WD repeat-containing protein 88Chromosome-19WD repeat-containing protein 88
Q8N8Z8ZNF441Zinc finger protein 441Chromosome-19Zinc finger protein 441
Q96RP8KCNA7Potassium voltage-gated channel subfamily A member 7Chromosome-19Potassium voltage-gated channel subfamily A member 7
Q9UBC7GALPGalanin-like peptideChromosome-19Galanin-like peptide
Q9GZP7VN1R1Vomeronasal type-1 receptor 1Chromosome-19Vomeronasal type-1 receptor 1
Q8N7U7TPRX1Tetra-peptide repeat homeobox protein 1Chromosome-19Tetra-peptide repeat homeobox protein 1
I3L273GFYGolgi-associated olfactory signaling regulatorChromosome-19Golgi-associated olfactory signaling regulator
O75437ZNF254Zinc finger protein 254Chromosome-19Zinc finger protein 254
Q96PE6ZIM3Zinc finger imprinted 3Chromosome-19Zinc finger imprinted 3
Q86YE8ZNF573Zinc finger protein 573Chromosome-19Zinc finger protein 573

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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