image source:http://filthy-frank.wikia.com/wiki/Chromosomes?file=Chromosome.jpg

The MissingProteinPedia is a protein data and information sharing web system that aims to collate any relevant data ‘Missing proteins’ as defined by neXtProt. At its core is a schema-less database-driven web system allowing captures of all PE2-4 protein PubMed data, based on gene and protein including synonyms. The database also allows unpublished, preliminary or proprietary data (e.g., antibody, MS, cell biological and genetic studies) to be shared with collaborators via a protected interface.


MissingProteinPedia facilitates the Human Proteome Project (HPP) cross-disciplinary collaboration by providing a complimentary, unfiltered, lower stringency perspective to both the HPP metrics and guidelines approaches, enabling community evaluation and scrutiny. MissingProteinPedia incorporates text mining technology to fetch and search accumulated UniProt, GeneCards, GeneRifs, PubMed PE2-4 data. Besides, MissingProteinPedia summarizes publicly available MS data from PRIDE, GPMDB, ProteomicsDB and MaxQB for relevant PE2-4 proteins. It allows community administrators to curate information before web publication.


We encourage all visitors to browse and contribute to 'finding' these proteins by sharing any relevant information on them that we may have missed!

        

Showing 181-200 of 1,482 items.
Protein IDGene IDProtein NameChromosome IDGene NameTag(s) 
 
Q9H943C10orf68Uncharacterized protein C10orf68Chromosome-10Uncharacterized protein C10orf68
Q8N9B8RASGEF1ARas-GEF domain-containing family member 1AChromosome-10Ras-GEF domain-containing family member 1A
Q5VYJ5MALRD1MAM and LDL-receptor class A domain-containing protein 1Chromosome-10MAM and LDL-receptor class A domain-containing protein 1
P17030ZNF25Zinc finger protein 25Chromosome-10Zinc finger protein 25
Q969W1ZDHHC16Probable palmitoyltransferase ZDHHC16Chromosome-10Probable palmitoyltransferase ZDHHC16
A6NNW6ENO4Enolase-like protein ENO4Chromosome-10Enolase-like protein ENO4
Q86X67NUDT13Nucleoside diphosphate-linked moiety X motif 13Chromosome-10Nucleoside diphosphate-linked moiety X motif 13
P50391NPY4RNeuropeptide Y receptor type 4Chromosome-10Neuropeptide Y receptor type 4
Q5T764IFIT1BInterferon-induced protein with tetratricopeptide repeats 1BChromosome-10Interferon-induced protein with tetratricopeptide repeats 1B
Q86XJ0CALHM3Calcium homeostasis modulator protein 3Chromosome-10Calcium homeostasis modulator protein 3
A6NNA5DRGXDorsal root ganglia homeobox proteinChromosome-10Dorsal root ganglia homeobox protein
P0C7Q2ARMS2Age-related maculopathy susceptibility protein 2Chromosome-10Age-related maculopathy susceptibility protein 2
Q86XD8ZFAND4AN1-type zinc finger protein 4Chromosome-10AN1-type zinc finger protein 4
Q9GZQ6NPFFR1Neuropeptide FF receptor 1Chromosome-10Neuropeptide FF receptor 1
Q7Z4W2LYZL2Lysozyme-like protein 2Chromosome-10Lysozyme-like protein 2
Q5VXI9LIPNLipase member NChromosome-10Lipase member N
Q9NZ38IDI2-AS1Uncharacterized protein IDI2-AS1Chromosome-10Uncharacterized protein IDI2-AS1
Q17RR3PNLIPRP3Pancreatic lipase-related protein 3Chromosome-10Pancreatic lipase-related protein 3
Q5VXJ0LIPKLipase member KChromosome-10Lipase member K
O76050NEURL1E3 ubiquitin-protein ligase NEURL1Chromosome-10E3 ubiquitin-protein ligase NEURL1

Related Publications

Publications to be cited for using MPP data and services

Islam, M.T. et al. Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the “Missing” Human Proteome. Journal of Proteome Research 13 (1), 76-83, doi: 10.1021/pr400794x (2014)
Islam, M.T. et al. A systematic bioinformatics approach to identify high quality MS data and functionally annotate proteins and proteomes. Methods Mol. Biol.1549, 163–176, doi: 10.1007/978-1-4939-6740-7_13 (2016)
Baker, M. S. et al. Accelerating the search for the missing proteins in the human proteome. Nat. Commun. 8, 14271 doi: 10.1038/ncomms14271 (2017).
Islam, M.T. et al. Missing ProteinPedia - under preparation.

Proteomics

Professor Mark S. Baker

  •  Department of Biomedical Sciences,

           Faculty of Medicine and Health Sciences,

           Level 1, 75 Talavera Rd, Macquarie University, NSW 2109, Australia
  • mark.baker@mq.edu.au

Bioinformatics, Database and Web Administration

Professor Shoba Ranganathan

  •  Department of Biomedical Sciences,

           Department of Chemistry and Biomolecular Science,

           Building F7B Room 121, Macquarie University, NSW 2109, Australia
  • shoba.ranganathan@mq.edu.au

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