BARHL1:BarH-like 1 homeobox protein

Gene Name
BarH-like 1 homeobox protein
Protein ID
Q9BZE3
Chromosome ID
9
HPP Status
2
Protein Name
BarH-like 1 homeobox protein
Synonyms

BarH (Drosophila)-like 1

barH-like 1 homeobox protein

BarH-like homeobox 1


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=BARHL1 ]
Chromosomal Position
9q34.13 | Start:132582185 End:132582185
Sequence
Q9BZE3.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=BARHL1 ]
External IDs
Hgnc ID: 953 EntrezGene ID: 56751 Ensembl ID: ENSG00000125492
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=BARHL1 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
21602885expression of Barhl1 decelerates tumor growth both in human and in murine medulloblastomas.2012-01-14
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceBARH1_HUMANTLX1_MOUSE3277853.8523.853601772542022796E-1888
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
BARH1_HUMANIPR001356GO:0003700DomainHomeobox domainMolecular Functionsequence-specific DNA binding transcription factor activity
BARH1_HUMANIPR001356GO:0043565DomainHomeobox domainMolecular Functionsequence-specific DNA binding
BARH1_HUMANIPR009057GO:0003677DomainHomeodomain-likeMolecular FunctionDNA binding
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q9BZE3_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q9BZE3_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB