FOXD4L3:Forkhead box protein D4-like 3

Gene Name
Forkhead box protein D4-like 3
Protein ID
Q6VB84
Chromosome ID
9
HPP Status
2
Protein Name
Forkhead box protein D4-like 3
Synonyms

forkhead box D4 like 3

forkhead box D4-like 3

FOXD4-like 2

FOXD6

forkhead box protein D4-like 2

FOXD4L2

Forkhead box protein D4-like 3

FOXD4-like 3


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXD4L3 ]
Chromosomal Position
9q21.11 | Start:68302867 End:68302867
Sequence
Q6VB84.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXD4L3 ]
External IDs
Hgnc ID: 18523 EntrezGene ID: 286380 Ensembl ID: ENSG00000187559
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXD4L3 ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceFX4L3_HUMANFOXD3_RAT4179087.7821.581101071962912E-44176
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
FX4L3_HUMANIPR001766GO:0003700DomainTranscription factor, fork headMolecular Functionsequence-specific DNA binding transcription factor activity
FX4L3_HUMANIPR001766GO:0043565DomainTranscription factor, fork headMolecular Functionsequence-specific DNA binding
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q6VB84_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q6VB84_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q6VB84_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB