DUXA:Double homeobox protein A

Gene Name
Double homeobox protein A
Protein ID
A6NLW8
Chromosome ID
19
HPP Status
3
Protein Name
Double homeobox protein A
Synonyms

double homeobox protein A

double homeobox A


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXA ]
Chromosomal Position
19q13.43 | Start:57154021 End:57154021
Sequence
A6NLW8.fasta
Description

Entrez Gene Summary for DUXA
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This gene is a member of the DUXA homeobox gene family. Evidence of mRNA expression has not yet been found for this gene. Multiple, related processed pseudogenes have been found which are thought to reflect expression of this gene in the germ line or embryonic cells. (provided by RefSeq, Jul 2008)

UniProtKB Summary for DUXA
Function: Putative transcription factor (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXA ]
External IDs
Hgnc ID: 32179 EntrezGene ID: 503835 Ensembl ID: ENSG00000258873
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXA ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceDUXA_HUMANPAX3_MOUSE2045752.6327.94270991552172733E-1061
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/A6NLW8_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/A6NLW8_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/A6NLW8_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB