OR13C4:Olfactory receptor 13C4

Gene Name
Olfactory receptor 13C4
Protein ID
Q8NGS5
Chromosome ID
9
HPP Status
3
Protein Name
Olfactory receptor 13C4
Synonyms

olfactory receptor, family 13, subfamily C, member 4

OR2K1

olfactory receptor 13C4

HSHTPCRX17

OR9-7

HTPCRX17

Olfactory receptor OR9-7

OR37F

olfactory receptor OR9-7

olfactory receptor, family 2, subfamily K, member 1


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR13C4 ]
Chromosomal Position
9q31.1 | Start:104526253 End:104526253
Sequence
Q8NGS5.fasta
Description

Entrez Gene Summary for OR13C4
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. (provided by RefSeq, Jul 2008)

UniProtKB Summary for OR13C4
Function: Odorant receptor (Potential)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR13C4 ]
External IDs
Hgnc ID: 14722 EntrezGene ID: 138804 Ensembl ID: ENSG00000148136
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR13C4 ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
O13C4_HUMANIPR000276GO:0004930FamilyG protein-coupled receptor, rhodopsin-likeMolecular FunctionG-protein coupled receptor activity
O13C4_HUMANIPR000276GO:0007186FamilyG protein-coupled receptor, rhodopsin-likeBiological ProcessG-protein coupled receptor signaling pathway
O13C4_HUMANIPR000276GO:0016021FamilyG protein-coupled receptor, rhodopsin-likeCellular Componentintegral to membrane
O13C4_HUMANIPR000725GO:0004984FamilyOlfactory receptorMolecular Functionolfactory receptor activity
O13C4_HUMANIPR000725GO:0007186FamilyOlfactory receptorBiological ProcessG-protein coupled receptor signaling pathway
O13C4_HUMANIPR000725GO:0016021FamilyOlfactory receptorCellular Componentintegral to membrane
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

KEGG Pathways

Pathway IDDatabase NamePathway Name
hsa04740KEGG PATHWAYOlfactory transduction
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-20 of 62 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
YPIIMNKyellow-7.11351ENSP00000277216Proteotypic
YPIIMNKyellow-7.11351ENSP00000277216Proteotypic
YPIIMNKyellow-7.01351ENSP00000277216Proteotypic
YPIIMNKyellow-7.01351ENSP00000277216Proteotypic
YPIIMNKyellow-7.01351ENSP00000277216Proteotypic
YPIIMNKyellow-7.01351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.91351ENSP00000277216Proteotypic
YPIIMNKyellow-6.71351ENSP00000277216Proteotypic
YPIIMNKyellow-6.71351ENSP00000277216Proteotypic
YPIIMNKyellow-6.71351ENSP00000277216Proteotypic
YPIIMNKyellow-6.71351ENSP00000277216Proteotypic
YPIIMNKyellow-6.61351ENSP00000277216Proteotypic
YPIIMNKyellow-6.61351ENSP00000277216Proteotypic
Evidence File
/mnt/mpp/ms_data/Q8NGS5_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q8NGS5_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q8NGS5_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB