ZFP30:Zinc finger protein 30 homolog

Gene Name
Zinc finger protein 30 homolog
Protein ID
Q9Y2G7
Chromosome ID
19
HPP Status
2
Protein Name
Zinc finger protein 30 homolog
Synonyms

zinc finger protein 745

ZNF745

ZFP30 zinc finger protein

Zfp-30

KIAA0961

zinc finger protein 30 homolog

zfp-30

Zinc finger protein 745

zinc finger protein 30 homolog (mouse)


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFP30 ]
Chromosomal Position
19q13.12 | Start:37613749 End:37613749
Sequence
Q9Y2G7.fasta
Description

UniProtKB Summary for ZFP30
Function: May be involved in transcriptional regulation

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFP30 ]
External IDs
Hgnc ID: 29555 EntrezGene ID: 22835 Ensembl ID: ENSG00000120784
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFP30 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
19851296Observational study of gene-disease association. (HuGE Navigator)2009-12-02
20198315Observational study of gene-disease association. (HuGE Navigator)2010-04-07
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceZFP30_HUMANZSCA2_MOUSE51937953.373.0317701385162306082E-115412
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-20 of 22 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
AFRQHSHLTYHQRgreen-10.3301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-10.3301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.3301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.3301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.3301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.3301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.2301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.2301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.0301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-9.0301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.4301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.4301ENSP00000422930Proteotypic
YSELISHQGIHIGEKgreen-8.331ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.3301ENSP00000422930Proteotypic
YSELISHQGIHIGEKgreen-8.331ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.3301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.2301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.2301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.0301ENSP00000422930Proteotypic
AFRQHSHLTYHQRgreen-8.0301ENSP00000422930Proteotypic
Evidence File
/mnt/mpp/ms_data/Q9Y2G7_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


MaxQB

Evidence File
/mnt/mpp/ms_data/Q9Y2G7_maxqb.txt
Reference
Christoph Schaab, Tamar Geiger, Gabriele Stoehr, Juergen Cox and Matthias Mann: "Analysis of high-accuracy, quantitative proteomics data in the MaxQB database", Mol Cell Proteomics 11 (2012) M111.014068.
http://maxqb.biochem.mpg.de/mxdb/ ">MaxQB


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q9Y2G7_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-1 of 1 item.

Proteomics DB

Peptide SequenceSearch EngineScoreThreshold ScoreIdentification IDExperiment IDAnnotation
SCGLEEQESPHEVCFRMaxquant237.320249614865127
Evidence File
/mnt/mpp/ms_data/Q9Y2G7_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB