ZNF304:Zinc finger protein 304

Gene Name
Zinc finger protein 304
Protein ID
Q9HCX3
Chromosome ID
19
HPP Status
1
Protein Name
Zinc finger protein 304
Synonyms

zinc finger protein 304


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF304 ]
Chromosomal Position
19q13.43 | Start:57351307 End:57351307
Sequence
Q9HCX3.fasta
Description

UniProtKB Summary for ZNF304
Function: May be involved in transcriptional regulation

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF304 ]
External IDs
Hgnc ID: 13505 EntrezGene ID: 57343 Ensembl ID: ENSG00000131845
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF304 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
12051768Identification of ZNF304, by AU-motif-directed display method and characterization of its role in lymphocyte activation2010-01-21
26081979transcriptional regulator of beta1 integrin, promotes cancer cell survival and protects against anoikis in ovarian cancer2016-04-23
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceZN304_HUMANZSCA2_MOUSE65940652.7161.6119202386432096149E-130460
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-18 of 18 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
FFSQSSHLIEHWRgreen-15.0241ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-15.0241ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-15.0241ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-15.0241ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-13.3241ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-13.3241ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-12.3381ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-12.3381ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-11.9241ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-11.9241ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-11.0381ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-11.0381ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-9.0241ENSP00000282286Proteotypic
FFSQSSHLIEHWRgreen-9.0241ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-7.9381ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-7.9381ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-7.2381ENSP00000282286Proteotypic
SFTCREEGMDLPDSSGLFQHQTTYNRgreen-7.2381ENSP00000282286Proteotypic
Evidence File
/mnt/mpp/ms_data/Q9HCX3_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Showing 1-1 of 1 item.

MaxQB

Peptide SequenceSearch EngineBest ScoreBest Evidence IDBest Raw File IDBest Msms ScanAnnotation
FFSHNSSLIKMaxQuant145.41214371220120217_EXQ5_KiSh_SA_LabelFree_HeLa_Phospho_Nocodazole_rep4_Fr420966
Evidence File
/mnt/mpp/ms_data/Q9HCX3_maxqb.txt
Reference
Christoph Schaab, Tamar Geiger, Gabriele Stoehr, Juergen Cox and Matthias Mann: "Analysis of high-accuracy, quantitative proteomics data in the MaxQB database", Mol Cell Proteomics 11 (2012) M111.014068.
http://maxqb.biochem.mpg.de/mxdb/ ">MaxQB


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q9HCX3_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-1 of 1 item.

Proteomics DB

Peptide SequenceSearch EngineScoreThreshold ScoreIdentification IDExperiment IDAnnotation
TAESGLFQKAHPCEMCDPLLKMaxquant115.4608088674632357
Evidence File
/mnt/mpp/ms_data/Q9HCX3_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB