ZNF582:Zinc finger protein 582

Gene Name
Zinc finger protein 582
Protein ID
Q96NG8
Chromosome ID
19
HPP Status
2
Protein Name
Zinc finger protein 582
Synonyms

zinc finger protein 582


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF582 ]
Chromosomal Position
19q13.43 | Start:56375846 End:56375846
Sequence
Q96NG8.fasta
Description

UniProtKB Summary for ZNF582
Function: May be involved in transcriptional regulation

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF582 ]
External IDs
Hgnc ID: 26421 EntrezGene ID: 147948 Ensembl ID: ENSG00000018869
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF582 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
22815913ZNF582 is frequently methylated in cervical intraepithelial neoplasia 3 and worse lesions2013-01-26
24407576Methylation levels of ZNF582 in uterine cervix adenocarcinomas is significantly higher than those in normal cervical tissues.2014-10-18
25134998This is the first study to show that ZNF582 methylation analysis of cervical swabs may be a promising choice in the positive triage of cytological diagnoses of low-grade squamous intraepithelial lesions2014-12-27
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceZN582_HUMANZ354C_RAT51729252.0556.4814001514422545452E-83305
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q96NG8_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q96NG8_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-4 of 4 items.

Proteomics DB

Peptide SequenceSearch EngineScoreThreshold ScoreIdentification IDExperiment IDAnnotation
AFNSGSNFIQHQRMaxquant134.9801319193802-1
AFNSGSNFIQHQRMaxquant133.0501319193801-1
SQLIQHQTVHTGRMaxquant127.0201323803976-1
TLSHDSTTVQPQRMaxquant120.8701324110826-1
Evidence File
/mnt/mpp/ms_data/Q96NG8_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB