PPP1R42:Protein phosphatase 1 regulatory subunit 42

Gene Name
Protein phosphatase 1 regulatory subunit 42
Protein ID
Q7Z4L9
Chromosome ID
8
HPP Status
2
Protein Name
Protein phosphatase 1 regulatory subunit 42
Synonyms

protein phosphatase 1 regulatory subunit 42

Leucine-rich repeat-containing protein 67

LRRC67

"testis leucine-rich repeat"

TLLR

dtr

leucine-rich repeat-containing protein 67

protein phosphatase 1, regulatory subunit 42

testis leucine-rich repeat

leucine rich repeat containing 67


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R42 ]
Chromosomal Position
8q13.1 | Start:66964099 End:66964099
Sequence
Q7Z4L9.fasta
Description

UniProtKB Summary for PPP1R42
Function: Regulates phosphatase activity of protein phosphatase 1 (PP1) complexes in the testis (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R42 ]
External IDs
Hgnc ID: 33732 EntrezGene ID: 286187 Ensembl ID: ENSG00000178125
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R42 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
23718219PPP1R42 regulation of PP1 function in centrosome separation.2014-02-15
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidencePPR42_HUMANPPR42_MOUSE35535782.91100.56592135513573E-135477
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q7Z4L9_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q7Z4L9_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q7Z4L9_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB