TEX15:Testis-expressed sequence 15 protein

Gene Name
Testis-expressed sequence 15 protein
Protein ID
Q9BXT5
Chromosome ID
8
HPP Status
2
Protein Name
Testis-expressed sequence 15 protein
Synonyms

cancer/testis antigen 42

CT42

testis expressed sequence 15

testis expressed 15

testis-expressed sequence 15 protein

Cancer/testis antigen 42

"cancer/testis antigen 42"


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEX15 ]
Chromosomal Position
8p12 | Start:30831544 End:30831544
Sequence
Q9BXT5.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEX15 ]
External IDs
Hgnc ID: 11738 EntrezGene ID: 56154 Ensembl ID: ENSG00000133863
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEX15 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
20378615Observational study of gene-disease association. (HuGE Navigator)2010-06-30
22581801the polymorphisms rs323346 and rs323347 of the TEX15 gene could be considered the genetic risk factors for spermatogenic failure in the Chinese Han population2013-05-04
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
All Reviewed HumanTEX15_HUMANTEX15_HUMAN2789278910010000127891278905463
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
TEX15_HUMANIPR026616GO:0007129FamilyTestis-expressed sequence 15 proteinBiological Processsynapsis
TEX15_HUMANIPR026616GO:0007140FamilyTestis-expressed sequence 15 proteinBiological Processmale meiosis
TEX15_HUMANIPR026616GO:0010569FamilyTestis-expressed sequence 15 proteinBiological Processregulation of double-strand break repair via homologous recombination
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q9BXT5_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


MaxQB

Evidence File
/mnt/mpp/ms_data/Q9BXT5_maxqb.txt
Reference
Christoph Schaab, Tamar Geiger, Gabriele Stoehr, Juergen Cox and Matthias Mann: "Analysis of high-accuracy, quantitative proteomics data in the MaxQB database", Mol Cell Proteomics 11 (2012) M111.014068.
http://maxqb.biochem.mpg.de/mxdb/ ">MaxQB


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q9BXT5_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-1 of 1 item.

Proteomics DB

Peptide SequenceSearch EngineScoreThreshold ScoreIdentification IDExperiment IDAnnotation
NVNFSAAETKSDKMaxquant116.240249500915127
Evidence File
/mnt/mpp/ms_data/Q9BXT5_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB