TMEM71:Transmembrane protein 71

Gene Name Transmembrane protein 71	Protein ID Q6P5X7	Chromosome ID 8	HPP Status 2
Protein Name Transmembrane protein 71		Synonyms transmembrane protein 71 [Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM71 ]
Chromosomal Position 8q24.22 | Start:132685007 End:132685007		Sequence Q6P5X7.fasta
Description [Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM71 ]
External IDs Hgnc ID: 26572 EntrezGene ID: 137835 Ensembl ID: ENSG00000165071 [Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM71 ]
Reference Source http://www.nextprot.org

OMICSDI Browser

Relevant citations within the PubMed literature

Putative/known Functions

Localisation

Homologues, Orthologues, Paralogues and Family

Sequence Similarity and Functional Annotation

Sequence Similarity

Post Translational Modifications

Protein Protein Interactions

Best Available Mass Spectra without FDR

Showing 1-2 of 2 items.

PRIDE

All

	Peptide Sequence	Scores	Pride ID	Spectrum ID	Annotation
	MYRISQLMSTPVASSSR	6.9,X!Tandem:expect;	PXD000674_34580_3483_Q6P5X7_MYRISQLMSTPVASSSR	PXD000674;PeptideShaker_Example_Dataset.xml;spectrum=3483
	FQENSSDHSETR	0.0226491528483708,Mascot:expectation;37.67,Mascot:score;	PXD000764_34937_311_Q6P5X7_FQENSSDHSETR	PXD000764;C133.mgf;index=496

Evidence File /mnt/mpp/ms_data/Q6P5X7_pridedb.txt

Reference Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456. https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive

Showing 1-5 of 5 items.

PRIDE

All

	Peptide Sequence	Scores	Pride ID	Spectrum ID	Annotation
	MYRISQLMSTPVASSSR	6.9,X!Tandem:expect;	PXD000674_34580_3483_Q6P5X7_MYRISQLMSTPVASSSR	PXD000674;PeptideShaker_Example_Dataset.xml;spectrum=3483
	FQENSSDHSETR	0.0226491528483708,Mascot:expectation;37.67,Mascot:score;	PXD000764_34937_311_Q6P5X7_FQENSSDHSETR	PXD000764;C133.mgf;index=496
	FQENSSDHSETR	0.098721966,MS-GF:EValue;46.0,MS-GF:RawScore;0.012610929,MS-GF:PepQValue;0.008967224,MS-GF:QValue;83.0,MS-GF:DeNovoScore;	PXD002085_51274_2496_Q6P5X7_FQENSSDHSETR	PXD002085;TCGA-AA-A02E-01A-23_W_VU_20120909_A0218_3B_R_FR15.mzML;controllerType=0 controllerNumber=1 scan=2222
	ENLVRIFR	0.022613337,MS-GF:EValue;0.0031653917,MS-GF:QValue;16.0,MS-GF:RawScore;0.005896806,MS-GF:PepQValue;20.0,MS-GF:DeNovoScore;	PXD002082_50854_567_Q6P5X7_ENLVRIFR	PXD002082;TCGA-AA-A004-01A-22_W_VU_20121020_A0218_4J_R_FR04.mzML;controllerType=0 controllerNumber=1 scan=4551
	FQENSSDHSETR	31.0,MS-GF:RawScore;0.014313598,MS-GF:PepQValue;0.006980803,MS-GF:QValue;0.03558629,MS-GF:EValue;49.0,MS-GF:DeNovoScore;	PXD002080_50580_555_Q6P5X7_FQENSSDHSETR	PXD002080;TCGA-A6-3808-01A-22_W_VU_20121205_A0218_7D_R_FR01.mzML;controllerType=0 controllerNumber=1 scan=2086

Evidence File /mnt/mpp/ms_data/Q6P5X7_pridedb.txt

Reference Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456. https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive

Proteomics DB

All

	Peptide Sequence	Search Engine	Score	Threshold Score	Identification ID	Experiment ID	Annotation
No results found.

Evidence File /mnt/mpp/ms_data/Q6P5X7_protdb.txt

Reference Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7. https://www.proteomicsdb.org/ ">Proteomics DB

Showing 1-4 of 4 items.

Proteomics DB

All

	Peptide Sequence	Search Engine	Score	Threshold Score	Identification ID	Experiment ID	Annotation
	SLFLSLASYFK	Maxquant	86.898	0	271084837	96
	MYRISQLMSTPVASSSR	Mascot	16.7	26	794072388	2296
	YRISQLMSTPVASSSR	Mascot	27.03	31	1201046083	3000
	MYRISQLMSTPVASSSR	Mascot	27.87	30	879944685	2398

Evidence File /mnt/mpp/ms_data/Q6P5X7_protdb.txt

Reference Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7. https://www.proteomicsdb.org/ ">Proteomics DB