TMEM71:Transmembrane protein 71

Gene Name
Transmembrane protein 71
Protein ID
Q6P5X7
Chromosome ID
8
HPP Status
2
Protein Name
Transmembrane protein 71
Synonyms

transmembrane protein 71


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM71 ]
Chromosomal Position
8q24.22 | Start:132685007 End:132685007
Sequence
Q6P5X7.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM71 ]
External IDs
Hgnc ID: 26572 EntrezGene ID: 137835 Ensembl ID: ENSG00000165071
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM71 ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianTMM71_HUMANTMM71_MOUSE29529365.5399.32913129212842E-94342
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-2 of 2 items.

PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
MYRISQLMSTPVASSSR6.9,X!Tandem:expect;PXD000674_34580_3483_Q6P5X7_MYRISQLMSTPVASSSRPXD000674;PeptideShaker_Example_Dataset.xml;spectrum=3483
FQENSSDHSETR0.0226491528483708,Mascot:expectation;37.67,Mascot:score;PXD000764_34937_311_Q6P5X7_FQENSSDHSETRPXD000764;C133.mgf;index=496
Evidence File
/mnt/mpp/ms_data/Q6P5X7_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q6P5X7_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB