FABP12:Fatty acid-binding protein 12

Gene Name
Fatty acid-binding protein 12
Protein ID
A6NFH5
Chromosome ID
8
HPP Status
1
Protein Name
Fatty acid-binding protein 12
Synonyms

fatty acid binding protein ORF

fatty acid-binding protein 12

Probable fatty acid-binding protein ENSP00000353650

intracellular fatty acid-binding protein FABP12

fatty acid binding protein 12


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP12 ]
Chromosomal Position
8q21.13 | Start:81524981 End:81524981
Sequence
A6NFH5.fasta
Description

UniProtKB Summary for FABP12
Function: May play a role in lipid transport (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP12 ]
External IDs
Hgnc ID: 34524 EntrezGene ID: 646486 Ensembl ID: ENSG00000197416
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP12 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
18786628FABP12 arose as the result of tandem gene duplication, a mechanism that may have been instrumental to the expansion of the FABP family.2010-01-21
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceFBP12_HUMANMYP2_RABIT14013265.1594.29460113211327E-45175
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
FBP12_HUMANIPR000463GO:0005215DomainCytosolic fatty-acid bindingMolecular Functiontransporter activity
FBP12_HUMANIPR000463GO:0006810DomainCytosolic fatty-acid bindingBiological Processtransport
FBP12_HUMANIPR000463GO:0008289DomainCytosolic fatty-acid bindingMolecular Functionlipid binding
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-1 of 1 item.

PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
MIDQLQGTWK0.0191240162625386,Mascot:expectation;20.8,Mascot:score;PXD002990_58254_17596_A6NFH5_MIDQLQGTWKPXD002990;20140804_Corinne.mgf;index=95563
Evidence File
/mnt/mpp/ms_data/A6NFH5_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/A6NFH5_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB