C8orf46:Uncharacterized protein C8orf46

Gene Name
Uncharacterized protein C8orf46
Protein ID
Q8TAG6
Chromosome ID
8
HPP Status
1
Protein Name
Uncharacterized protein C8orf46
Synonyms

uncharacterized protein C8orf46

chromosome 8 open reading frame 46


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=C8ORF46 ]
Chromosomal Position
8q13.1 | Start:66460003 End:66460003
Sequence
Q8TAG6.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=C8ORF46 ]
External IDs
Hgnc ID: 28498 EntrezGene ID: 254778 Ensembl ID: ENSG00000169085
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=C8ORF46 ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianCH046_HUMANCH046_PONAB20720799.5210010120712075E-108387
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-2 of 2 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
NVVIESDLYTHQPLELLPHRgreen-9.1201ENSP00000302260Proteotypic
NVVIESDLYTHQPLELLPHRgreen-9.1201ENSP00000302260Proteotypic
Evidence File
/mnt/mpp/ms_data/Q8TAG6_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q8TAG6_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q8TAG6_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB