CNBD1:Cyclic nucleotide-binding domain-containing protein 1

Gene Name
Cyclic nucleotide-binding domain-containing protein 1
Protein ID
Q8NA66
Chromosome ID
8
HPP Status
2
Protein Name
Cyclic nucleotide-binding domain-containing protein 1
Synonyms

cyclic nucleotide-binding domain-containing protein 1

cyclic nucleotide binding domain containing 1


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNBD1 ]
Chromosomal Position
8q21.3 | Start:86866442 End:86866442
Sequence
Q8NA66.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNBD1 ]
External IDs
Hgnc ID: 26663 EntrezGene ID: 168975 Ensembl ID: ENSG00000176571
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNBD1 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
18825932Observational study of gene-disease association. (HuGE Navigator)2008-10-19
20379614Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)2010-06-30
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
All Reviewed HumanCNBD1_HUMANCNBD1_HUMAN43643610010000143614360904
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q8NA66_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q8NA66_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q8NA66_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB