FUT10:Alpha-(1,3)-fucosyltransferase 10

Gene Name
Alpha-(1,3)-fucosyltransferase 10
Protein ID
Q6P4F1
Chromosome ID
8
HPP Status
2
Protein Name
Alpha-(1,3)-fucosyltransferase 10
Synonyms

Fucosyltransferase X

fuc-TX

Galactoside 3-L-fucosyltransferase 10

Fucosyltransferase 10

alpha-(1,3)-fucosyltransferase 10

galactoside 3-L-fucosyltransferase 10

fucT-X

fucosyltransferase X

Fuc-TX

alpha 1,3-fucosyl transferase

fucosyltransferase 10 (alpha (1,3) fucosyltransferase)

FucT-X

EC 2.4.1.-


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FUT10 ]
Chromosomal Position
8p12 | Start:33370824 End:33370824
Sequence
Q6P4F1.fasta
Description

UniProtKB Summary for FUT10
Function: Probable fucosyltransferase (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FUT10 ]
External IDs
Hgnc ID: 19234 EntrezGene ID: 84750 Ensembl ID: ENSG00000172728
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=FUT10 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
12370785amino acid sequence2010-01-21
19088067Activity, splice variants, conserved peptide motifs, and phylogeny of two new alpha1,3-fucosyltransferase families (FUT10 and FUT11).2010-01-21
20379614Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)2010-06-30
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianFUT10_HUMANFUT10_CANFA47947987.89100571147914780885
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
FUT10_HUMANIPR001503GO:0006486FamilyGlycosyl transferase, family 10Biological Processprotein glycosylation
FUT10_HUMANIPR001503GO:0008417FamilyGlycosyl transferase, family 10Molecular Functionfucosyltransferase activity
FUT10_HUMANIPR001503GO:0016020FamilyGlycosyl transferase, family 10Cellular Componentmembrane
FUT10_HUMANIPR017176GO:0000139FamilyAlpha-(1, 3)-fucosyltransferase, metazoanCellular ComponentGolgi membrane
FUT10_HUMANIPR017176GO:0006486FamilyAlpha-(1, 3)-fucosyltransferase, metazoanBiological Processprotein glycosylation
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q6P4F1_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q6P4F1_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q6P4F1_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB