TMEM30C:Cell cycle control protein 50C

Gene Name
Cell cycle control protein 50C
Protein ID
A0ZSE6
Chromosome ID
3
HPP Status
2
Protein Name
Cell cycle control protein 50C
Synonyms

CDC50C

transmembrane protein 30C

CDC50C

Transmembrane protein 30C


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM30C ]
Chromosomal Position
3q12.1 | Start:100185824 End:100185824
Sequence
A0ZSE6.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM30C ]
External IDs
Hgnc ID: 30443 EntrezGene ID: 644444 Ensembl ID: ENSG00000235156
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM30C ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianCC50C_HUMANCC50C_PANTR11310199.0189.3810110111012.00E-55210
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
CC50C_HUMANIPR005045GO:0016020FamilyProtein of unknown function DUF284, transmembrane eukaryoticCellular Componentmembrane
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/A0ZSE6_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Proteomics DB

Evidence File
/mnt/mpp/ms_data/A0ZSE6_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB