KIAA1456:Probable tRNA methyltransferase 9-like protein

Gene Name
Probable tRNA methyltransferase 9-like protein
Protein ID
Q9P272
Chromosome ID
8
HPP Status
2
Protein Name
Probable tRNA methyltransferase 9-like protein
Synonyms

TRM9L

KIAA1456

C8orf79

chromosome 8 open reading frame 79

putative methyltransferase KIAA1456

EC 2.1.1.-


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA1456 ]
Chromosomal Position
8p22 | Start:12945642 End:12945642
Sequence
Q9P272.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA1456 ]
External IDs
Hgnc ID: 26725 EntrezGene ID: 57604 Ensembl ID: ENSG00000250305
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA1456 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
23381944Study links hTRM9L and tRNA modifications to inhibition of tumour growth via LIN9 and HIF1-alpha-dependent mechanisms.2013-07-27
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianK1456_HUMANK1456_BOVIN45445478.85100951145414530725
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
K1456_HUMANIPR013216GO:0008152DomainMethyltransferase type 11Biological Processmetabolic process
K1456_HUMANIPR013216GO:0008168DomainMethyltransferase type 11Molecular Functionmethyltransferase activity
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q9P272_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q9P272_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-11 of 11 items.

Proteomics DB

Peptide SequenceSearch EngineScoreThreshold ScoreIdentification IDExperiment IDAnnotation
NTEVWASSTVTVQPSRMaxquant232.7801334524438-1
HSSLDFDHQEPFSTKMaxquant202.9201332753309-1
EGEEEYGFYSTLGKMaxquant190.2701331655653-1
HSSLDFDHQEPFSTKMaxquant173.3301310267112-1
SLDESTLRMaxquant160.1101335377351-1
VRPLKNTEVWASSTVTVQPSRMaxquant157.2201336352672-1
NTEVWASSTVTVQPSRMaxquant142.4501311852434-1
HSSLDFDHQEPFSTKMaxquant140.9601332753310-1
QDVLVPWNRMaxquant138.9801334841671-1
SLDESTLRKMaxquant136.5701335377354-1
ENVSELRMaxquant130.6401331850084-1
Evidence File
/mnt/mpp/ms_data/Q9P272_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB