ARGFX:Arginine-fifty homeobox

Gene Name
Arginine-fifty homeobox
Protein ID
A6NJG6
Chromosome ID
3
HPP Status
2
Protein Name
Arginine-fifty homeobox
Synonyms

arginine-fifty homeobox


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARGFX ]
Chromosomal Position
3q13.33 | Start:121570704 End:121570704
Sequence
A6NJG6.fasta
Description

Entrez Gene Summary for ARGFX
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This gene is a member of the ARGFX homeobox gene family. (provided by RefSeq, Jul 2008)

UniProtKB Summary for ARGFX
Function: Putative transcription factor (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARGFX ]
External IDs
Hgnc ID: 30146 EntrezGene ID: 503582 Ensembl ID: ENSG00000186103
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARGFX ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
ARGFX_HUMANIPR001356GO:0003700DomainHomeobox domainMolecular Functionsequence-specific DNA binding transcription factor activity
ARGFX_HUMANIPR001356GO:0043565DomainHomeobox domainMolecular Functionsequence-specific DNA binding
ARGFX_HUMANIPR009057GO:0003677DomainHomeodomain-likeMolecular FunctionDNA binding
ARGFX_HUMANIPR017970GO:0005634Conserved_siteHomeobox, conserved siteCellular Componentnucleus
ARGFX_HUMANIPR017970GO:0043565Conserved_siteHomeobox, conserved siteMolecular Functionsequence-specific DNA binding
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/A6NJG6_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Proteomics DB

Evidence File
/mnt/mpp/ms_data/A6NJG6_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB