LAMB4:Laminin subunit beta-4

Gene Name
Laminin subunit beta-4
Protein ID
A4D0S4
Chromosome ID
7
HPP Status
2
Protein Name
Laminin subunit beta-4
Synonyms

laminin beta-1-related protein

Laminin beta-1-related protein

laminin, beta 4

laminin subunit beta-4


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAMB4 ]
Chromosomal Position
7q31.1 | Start:108023548 End:108023548
Sequence
A4D0S4.fasta
Description

UniProtKB Summary for LAMB4
Function: Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAMB4 ]
External IDs
Hgnc ID: 6491 EntrezGene ID: 22798 Ensembl ID: ENSG00000091128
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAMB4 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
19401682Observational study of gene-disease association. (HuGE Navigator)2009-05-17
25257191Loss of LAMB4 expression was identified in 17-32% of the GC and CRC. Of note, the loss expression was more common in the cancers with LAMB4 mutation or those with MSI-H.2015-04-18
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation



Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/A4D0S4_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Showing 1-3 of 3 items.

PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
ITDLERK54.84,Mascot:score;8.32213710981426E-4,Mascot:expectation;PXD000039_27363_1846_A4D0S4_ITDLERKPXD000039;PRIDE_Exp_Complete_Ac_27363.xml;spectrum=1846
KIQDLNLSRQAK42.69,Mascot:score;0.00515628488737147,Mascot:expectation;PXD003271_59874_1708_A4D0S4_KIQDLNLSRQAKPXD003271;MR1993C.mgf;index=4781
KIQDLNLSRQAK0.00941510145715027,Mascot:expectation;37.87,Mascot:score;PXD003271_59863_972_A4D0S4_KIQDLNLSRQAKPXD003271;MR1272A.mgf;index=4102
Evidence File
/mnt/mpp/ms_data/A4D0S4_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-1 of 1 item.

Proteomics DB

Evidence File
/mnt/mpp/ms_data/A4D0S4_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB