ZAR1L:ZAR1-like protein

Gene Name
ZAR1-like protein
Protein ID
A6NP61
Chromosome ID
13
HPP Status
1
Protein Name
ZAR1-like protein
Synonyms

ZAR2

Z3CXXC7

zygote arrest 1-like

3CxxC-type 7"

"zinc finger

zinc finger, 3CxxC-type 7

ZAR1-like protein


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZAR1L ]
Chromosomal Position
13q13.1 | Start:32303700 End:32303700
Sequence
A6NP61.fasta
Description

Entrez Gene Summary for ZAR1L
This gene encodes a member of the ZAR1 family that is predominantly expressed in oocytes and early embryos. The protein may function as an RNA regulator in early embryos. (provided by RefSeq, Apr 2010)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZAR1L ]
External IDs
Hgnc ID: 37116 EntrezGene ID: 646799 Ensembl ID: ENSG00000189167
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZAR1L ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
19913121Observational study of gene-disease association. (HuGE Navigator)2010-09-15
20202217BRCA2 gene promoter has bi-directional activity, expressing BRCA2 and a novel C4-type zinc finger containing transcription factor ZAR2.2010-05-31
20628086Observational study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)2010-09-15
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianZAR1L_HUMANZAR1L_BOVIN32132167.291001022132113185.00E-111398
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-16 of 16 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
SFNPYRVEAIQCQTCSKgreen-12.461ENSP00000344616Proteotypic
SFNPYRVEAIQCQTCSKgreen-12.461ENSP00000344616Proteotypic
SFNPYRVEAIQCQTCSKgreen-10.761ENSP00000344616Proteotypic
SFNPYRVEAIQCQTCSKgreen-10.761ENSP00000344616Proteotypic
SGADRQEEPGQLEESGEKDAPCPQETKgreen-8.841ENSP00000344616Proteotypic
SGADRQEEPGQLEESGEKDAPCPQETKgreen-8.841ENSP00000344616Proteotypic
SGADRQEEPGQLEESGEKDAPCPQETKgreen-8.341ENSP00000344616Proteotypic
SGADRQEEPGQLEESGEKDAPCPQETKgreen-8.341ENSP00000344616Proteotypic
QEEPGQLEESGEKgreen-7.8151ENSP00000344616Proteotypic
QEEPGQLEESGEKgreen-7.8151ENSP00000344616Proteotypic
QEEPGQLEESGEKgreen-7.7151ENSP00000344616Proteotypic
QEEPGQLEESGEKgreen-7.7151ENSP00000344616Proteotypic
QEEPGQLEESGEKgreen-7.2151ENSP00000344616Proteotypic
QEEPGQLEESGEKgreen-7.2151ENSP00000344616Proteotypic
TLSSCSPWDGRDPQEPLPACGVTSPATGRgreen-6.721ENSP00000344616Proteotypic
TLSSCSPWDGRDPQEPLPACGVTSPATGRgreen-6.721ENSP00000344616Proteotypic
Evidence File
/mnt/mpp/ms_data/A6NP61_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/A6NP61_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive