LCE5A:Late cornified envelope protein 5A

Gene Name
Late cornified envelope protein 5A
Protein ID
Q5TCM9
Chromosome ID
1
HPP Status
2
Protein Name
Late cornified envelope protein 5A
Synonyms

Late envelope protein 18

late envelope protein 18

late cornified envelope 5A

LEP18

small proline-rich-like epidermal differentiation complex protein 5A

late cornified envelope protein 5A

small proline rich-like (epidermal differentiation complex) 5A

SPRL5A

Small proline-rich-like epidermal differentiation complex protein 5A


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=LCE5A ]
Chromosomal Position
1q21.3 | Start:152510844 End:152510844
Sequence
Q5TCM9.fasta
Description

UniProtKB Summary for LCE5A
Function: Precursors of the cornified envelope of the stratum corneum

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=LCE5A ]
External IDs
Hgnc ID: 16614 EntrezGene ID: 254910 Ensembl ID: ENSG00000186207
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=LCE5A ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
15854049paper describing nomenclature changes and expression in range of tissues and in response to UV2005-07-12
19601998Observational study of gene-disease association. (HuGE Navigator)2009-09-16
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
LCE5A_HUMANIPR028205GO:0008544FamilyLate cornified envelope proteinBiological Processepidermis development
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q5TCM9_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q5TCM9_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q5TCM9_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB