SLC22A15:Solute carrier family 22 member 15

Gene Name
Solute carrier family 22 member 15
Protein ID
Q8IZD6
Chromosome ID
1
HPP Status
1
Protein Name
Solute carrier family 22 member 15
Synonyms

solute carrier family 22 member 15

solute carrier family 22, member 15

fly-like putative organic ion transporter 1

Fly-like putative transporter 1

FLIPT1

trans-like protein

PRO34686

Flipt 1

fly-like putative transporter 1

solute carrier family 22 (organic cation transporter), member 15

flipt 1


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC22A15 ]
Chromosomal Position
1p13.1 | Start:115976498 End:115976498
Sequence
Q8IZD6.fasta
Description

Entrez Gene Summary for SLC22A15
Organic ion transporters, such as SLC22A15, transport various medically and physiologically important compounds, including pharmaceuticals, toxins, hormones, neurotransmitters, and cellular metabolites. These transporters are also referred to as amphiphilic solute facilitators (ASFs).(supplied by OMIM, Apr 2004)

UniProtKB Summary for SLC22A15
Function: Probably transports organic cations (By similarity). Appears not to be the agmatine transporter

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC22A15 ]
External IDs
Hgnc ID: 20301 EntrezGene ID: 55356 Ensembl ID: ENSG00000163393
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC22A15 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
12372408Flipts might have a role in carnitine transport, particularly in brain2010-01-21
20379614Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)2010-06-30
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
S22AF_HUMANIPR005828GO:0016021FamilyGeneral substrate transporterCellular Componentintegral to membrane
S22AF_HUMANIPR005828GO:0022857FamilyGeneral substrate transporterMolecular Functiontransmembrane transporter activity
S22AF_HUMANIPR005828GO:0055085FamilyGeneral substrate transporterBiological Processtransmembrane transport
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q8IZD6_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q8IZD6_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q8IZD6_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB