MAGEB16:Melanoma-associated antigen B16

Gene Name
Melanoma-associated antigen B16
Protein ID
A2A368
Chromosome ID
X
HPP Status
3
Protein Name
Melanoma-associated antigen B16
Synonyms

MAGE-B16 antigen

melanoma antigen family B, 16 (pseudogene)

melanoma-associated antigen B16

melanoma antigen family B, 16


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAGEB16 ]
Chromosomal Position
Xp21.1 | Start:35798342 End:35798342
Sequence
A2A368.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAGEB16 ]
External IDs
Hgnc ID: 21188 EntrezGene ID: 139604 Ensembl ID: ENSG00000189023
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAGEB16 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
24219866The testis-specific expression of MAGEB16 and Mageb16 is regulated by the methylation status of their promoter regions.2014-10-25
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceMAGBG_HUMANMAGG1_MOUSE3241985061.11981113309592568E-53203
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/A2A368_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


MaxQB

Evidence File
/mnt/mpp/ms_data/A2A368_maxqb.txt
Reference
Christoph Schaab, Tamar Geiger, Gabriele Stoehr, Juergen Cox and Matthias Mann: "Analysis of high-accuracy, quantitative proteomics data in the MaxQB database", Mol Cell Proteomics 11 (2012) M111.014068.
http://maxqb.biochem.mpg.de/mxdb/ ">MaxQB


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/A2A368_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-1 of 1 item.

Proteomics DB

Evidence File
/mnt/mpp/ms_data/A2A368_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB