BPIFB4:BPI fold-containing family B member 4

Gene Name
BPI fold-containing family B member 4
Protein ID
P59827
Chromosome ID
20
HPP Status
2
Protein Name
BPI fold-containing family B member 4
Synonyms

long palate, lung and nasal epithelium carcinoma-associated protein 4

Ligand-binding protein RY2G5

BPI fold containing family B, member 4

dJ726C3.5

BPI fold-containing family B member 4

chromosome 20 open reading frame 186

C20orf186

ligand-binding protein RY2G5

likely ortholog of rat probable ligand-binding protein RY2G5

Long palate, lung and nasal epithelium carcinoma-associated protein 4

long palate, lung and nasal epithelium carcinoma associated 4

LPLUNC4

RY2G5


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=BPIFB4 ]
Chromosomal Position
20q11.21 | Start:33079644 End:33079644
Sequence
P59827.fasta
Description

UniProtKB Summary for BPIFB4
Function: May have the capacity to recognize and bind specific classes of odorants. May act as a carrier molecule, transporting odorants across the mucus layer to access receptor sites. May serve as a primary defense mechanism by recognizing and removing potentially harmful odorants or pathogenic microorganisms from the mucosa or clearing excess odorant from mucus to enable new odorant stimuli to be received (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=BPIFB4 ]
External IDs
Hgnc ID: 16179 EntrezGene ID: 149954 Ensembl ID: ENSG00000186191
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=BPIFB4 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
20237496Observational study of gene-disease association. (HuGE Navigator)2010-04-07
26034043Longevity-associated variant-BPIFB4 may represent a novel therapeutic tool to fight endothelial dysfunction and promote vascular reparative processes.2015-11-07
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation



Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/P59827_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Showing 1-20 of 143 items.

PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR38.14,Mascot:PTM site assignment confidence;1.9161632400225E-5,Mascot:expectation;71.09,Mascot:score;PXD004144_64706_5438_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR2.37920850869768E-5,Mascot:expectation;30.72,Mascot:PTM site assignment confidence;70.15,Mascot:score;PXD004144_64706_5440_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR2.37920850869768E-5,Mascot:expectation;30.72,Mascot:PTM site assignment confidence;70.15,Mascot:score;PXD004144_64706_5440_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR2.37920850869768E-5,Mascot:expectation;30.72,Mascot:PTM site assignment confidence;70.15,Mascot:score;PXD004144_64706_5440_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR2.37920850869768E-5,Mascot:expectation;30.72,Mascot:PTM site assignment confidence;70.15,Mascot:score;PXD004144_64706_5440_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR2.37920850869768E-5,Mascot:expectation;30.72,Mascot:PTM site assignment confidence;70.15,Mascot:score;PXD004144_64706_5440_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR2.37920850869768E-5,Mascot:expectation;30.72,Mascot:PTM site assignment confidence;70.15,Mascot:score;PXD004144_64706_5440_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
DVLSNAISGMLQQSDALHSALR2.37920850869768E-5,Mascot:expectation;30.72,Mascot:PTM site assignment confidence;70.15,Mascot:score;PXD004144_64706_5440_P59827_DVLSNAISGMLQQSDALHSALRPXD004144;06032014_Mucus-07.mgf;index=12773
Evidence File
/mnt/mpp/ms_data/P59827_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Showing 1-1 of 1 item.

Proteomics DB

Peptide SequenceSearch EngineScoreThreshold ScoreIdentification IDExperiment IDAnnotation
VTKDVLSNAISGMLQQSDALHSALRMaxquant143.74027926697695
Evidence File
/mnt/mpp/ms_data/P59827_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB