ANKRD60:Ankyrin repeat domain-containing protein 60

Gene Name
Ankyrin repeat domain-containing protein 60
Protein ID
Q9BZ19
Chromosome ID
20
HPP Status
3
Protein Name
Ankyrin repeat domain-containing protein 60
Synonyms

C20orf86

ankyrin repeat domain-containing protein 60

ankyrin repeat domain 60

chromosome 20 open reading frame 86

bA196N14.3


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD60 ]
Chromosomal Position
20q13.32 | Start:58218495 End:58218495
Sequence
Q9BZ19.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD60 ]
External IDs
Hgnc ID: 16217 EntrezGene ID: 140731 Ensembl ID: ENSG00000124227
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD60 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
19893584Observational study and genome-wide association study of gene-disease association. (HuGE Navigator)2009-12-02
19913121Observational study of gene-disease association. (HuGE Navigator)2010-09-15
20628086Observational study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)2010-09-15
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
ANR60_HUMANIPR002110GO:0005515RepeatAnkyrin repeatMolecular Functionprotein binding
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q9BZ19_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q9BZ19_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q9BZ19_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB