ADIG:Adipogenin

Gene Name
Adipogenin
Protein ID
Q0VDE8
Chromosome ID
20
HPP Status
3
Protein Name
Adipogenin
Synonyms

SMAF1

"small adipocyte factor 1"

RP5-1100H13.2

adipogenesis associated

adipogenin

small adipocyte factor 1 (SMAF1)


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADIG ]
Chromosomal Position
20q11.23 | Start:38581195 End:38581195
Sequence
Q0VDE8.fasta
Description

Entrez Gene Summary for ADIG
ADIG/SMAF1 is an adipocyte-specific protein that plays a role in adipocyte differentiation (Kim et al., 2005 (PubMed 15567149); Hong et al., 2005 (PubMed 16132694)).(supplied by OMIM, Mar 2008)

UniProtKB Summary for ADIG
Function: Plays a role in stimulating adipocyte differentiation and development (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADIG ]
External IDs
Hgnc ID: 28606 EntrezGene ID: 149685 Ensembl ID: ENSG00000182035
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADIG ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
15567149Studies in mouse indicate the 80 aa SMAF1 protein is involved in adipocyte tissue function or regulation.2004-12-29
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianADIG_HUMANADIG_BOVIN808078.751001611791804.00E-2197
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
ADIG_HUMANIPR027938GO:0045444FamilyAdipogeninBiological Processfat cell differentiation
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




gpmDB

Evidence File
/mnt/mpp/ms_data/Q0VDE8_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q0VDE8_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB