ANKRD20A1:Ankyrin repeat domain-containing protein 20A1

Gene Name
Ankyrin repeat domain-containing protein 20A1
Protein ID
Q5TYW2
Chromosome ID
9
HPP Status
2
Protein Name
Ankyrin repeat domain-containing protein 20A1
Synonyms

ANKRD20A

ankyrin repeat domain-containing protein 20A1

ankyrin repeat domain 20 family, member A1

ankyrin repeat domain 20A


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A1 ]
Chromosomal Position
9q21.11 | Start:67859147 End:67859147
Sequence
Q5TYW2.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A1 ]
External IDs
Hgnc ID: 23665 EntrezGene ID: 84210 Ensembl ID: ENSG00000196774
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A1 ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceA20A1_HUMANANR26_MOUSE82321053.8125.52843219832126E-55212
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

InterProScan Annotation

Uniprot IDInterpro IDGo IDTypeNameCategoryDescription
A20A1_HUMANIPR002110GO:0005515RepeatAnkyrin repeatMolecular Functionprotein binding
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




MaxQB

Evidence File
/mnt/mpp/ms_data/Q5TYW2_maxqb.txt
Reference
Christoph Schaab, Tamar Geiger, Gabriele Stoehr, Juergen Cox and Matthias Mann: "Analysis of high-accuracy, quantitative proteomics data in the MaxQB database", Mol Cell Proteomics 11 (2012) M111.014068.
http://maxqb.biochem.mpg.de/mxdb/ ">MaxQB


PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
No results found.
Evidence File
/mnt/mpp/ms_data/Q5TYW2_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q5TYW2_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB