TMEM252:Transmembrane protein 252

Gene Name
Transmembrane protein 252
Protein ID
Q8N6L7
Chromosome ID
9
HPP Status
2
Protein Name
Transmembrane protein 252
Synonyms

transmembrane protein 252

chromosome 9 open reading frame 71

transmembrane protein C9orf71

C9orf71


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM252 ]
Chromosomal Position
9q21.11 | Start:68536580 End:68536580
Sequence
Q8N6L7.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM252 ]
External IDs
Hgnc ID: 28537 EntrezGene ID: 169693 Ensembl ID: ENSG00000181778
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM252 ]
Reference Source
http://www.nextprot.org

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalianTM252_HUMANTM252_PONAB17017098.8210020117011707E-96346
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 1-10 of 10 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
ESIAGLVVTAISEDAQRyellow-8.0361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-8.0361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-7.0361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-7.0361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-6.6361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-6.6361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-6.4361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-6.4361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-6.3361ENSP00000366528Proteotypic
ESIAGLVVTAISEDAQRyellow-6.3361ENSP00000366528Proteotypic
Evidence File
/mnt/mpp/ms_data/Q8N6L7_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Showing 1-1 of 1 item.

Proteomics DB

Peptide SequenceSearch EngineScoreThreshold ScoreIdentification IDExperiment IDAnnotation
ESIAGLVVTAISEDAQRMaxquant216.270248314120145
Evidence File
/mnt/mpp/ms_data/Q8N6L7_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB