AMIGO3:Amphoterin-induced protein 3

Gene Name
Amphoterin-induced protein 3
Protein ID
Q86WK7
Chromosome ID
3
HPP Status
2
Protein Name
Amphoterin-induced protein 3
Synonyms

Alivin-3

amphoterin-induced gene and ORF 3

alivin-3

KIAA1851

"amphoterin-induced gene and open reading frame 3"

AMIGO-3

amphoterin-induced protein 3

ALI3

adhesion molecule with Ig-like domain 3


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMIGO3 ]
Chromosomal Position
3p21.31 | Start:49716834 End:49716834
Sequence
Q86WK7.fasta
Description

UniProtKB Summary for AMIGO3
Function: May mediate heterophilic cell-cell interaction. May contribute to signal transduction through its intracellular domain (By similarity)

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMIGO3 ]
External IDs
Hgnc ID: 24075 EntrezGene ID: 386724 Ensembl ID: ENSG00000176020
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMIGO3 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
20307617Observational study of gene-disease association. (HuGE Navigator)2010-06-30
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
Reviewed non-human mammalian with experimental evidenceAMGO3_HUMANAMGO3_MOUSE50449176.1797.421131148714910657
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Total 2 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
LGHISVPELAALPAFLKred-7.421ENSP00000323096Proteotypic
LGHISVPELAALPAFLKred-7.421ENSP00000323096Proteotypic
Evidence File
/mnt/mpp/ms_data/Q86WK7_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q86WK7_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB