C1orf64:Uncharacterized protein C1orf64

Gene Name
Uncharacterized protein C1orf64
Protein ID
Q8NEQ6
Chromosome ID
1
HPP Status
2
Protein Name
Uncharacterized protein C1orf64
Synonyms

chromosome 1 open reading frame 64

uncharacterized protein C1orf64

"ER-related factor"

ERRF

ER-related factor


[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1ORF64 ]
Chromosomal Position
1p36.13 | Start:16004236 End:16004236
Sequence
Q8NEQ6.fasta
Description

[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1ORF64 ]
External IDs
Hgnc ID: 28339 EntrezGene ID: 149563 Ensembl ID: ENSG00000183888
[Reference: http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1ORF64 ]
Reference Source
http://www.nextprot.org

Gene Reference Into Function (GeneRIF)


PubMed IDGeneRIF TextLast Update
22341523These results suggest that ERRF plays a role in estrogen-ER-mediated growth of breast cancer cells.2012-04-28
Reference
http://www.ncbi.nlm.nih.gov/gene/about-generif
ftp://ftp.ncbi.nih.gov/gene/GeneRIF/

OMICSDI Browser



Relevant citations within the PubMed literature

         

Putative/known Functions



Localisation



Homologues, Orthologues, Paralogues and Family



Sequence Similarity and Functional Annotation


Sequence Similarity

Db NameQuery UniSubject UniSequence LengthAlignment LengthIdentityCoverageMismatchesGap OpeningsQuery StartQuery EndSubject StartSubject EndEvalueBit Score
All Reviewed HumanCA064_HUMANCA064_HUMAN16916910010000116911691.00E-86315
Reference
Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S (2014) Protannotator: A Semiautomated Pipeline for Chromosome-Wise Functional Annotation of the "Missing" Human Proteome. J Proteome Res. 13, 76-83.

Post Translational Modifications



Protein Protein Interactions



Best Available Mass Spectra without FDR




Showing 21-36 of 36 items.

gpmDB

Peptide SequenceEvidence LevelLog ENumber Of ObservationSpectraAccession IDProteotypicityAnnotation
TYIVFCGENWPHLTRgreen-11.4221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-11.4221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-11.4221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-11.4221ENSP00000332162Proteotypic
GSVASASFPVSPLCPQEVPEAKgreen-9.541ENSP00000332162Proteotypic
GSVASASFPVSPLCPQEVPEAKgreen-9.541ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-9.2221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-9.2221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-9.2221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-9.2221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-8.4221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-8.4221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-8.4221ENSP00000332162Proteotypic
TYIVFCGENWPHLTRgreen-8.4221ENSP00000332162Proteotypic
GSVASASFPVSPLCPQEVPEAKgreen-8.141ENSP00000332162Proteotypic
GSVASASFPVSPLCPQEVPEAKgreen-8.141ENSP00000332162Proteotypic
Evidence File
/mnt/mpp/ms_data/Q8NEQ6_gpmdb.txt
Reference
Fenyö, David; Beavis, Ronald C. (2015). "The GPMDB REST interface". Bioinformatics 31 (12): 2056–2058. doi:10.1093/bioinformatics/btv107. ISSN 1367-4803.
http://gpmdb.thegpm.org/ ">Global Proteome Machine Database - THE GPM


Showing 1-1 of 1 item.

PRIDE

Peptide SequenceScoresPride IDSpectrum IDAnnotation
VTPMGGGCLAQAR29.47,Mascot:score;0.0164460499261492,Mascot:expectation;PXD000764_34941_67_Q8NEQ6_VTPMGGGCLAQARPXD000764;79.mgf;index=3538
Evidence File
/mnt/mpp/ms_data/Q8NEQ6_pridedb.txt
Reference
Vizcaino JA, et al. 2016 update of the PRIDE database and related tools. Nucleic Acids Res. 2016 Jan 1;44(D1):D447-D456.
https://www.ebi.ac.uk/pride/archive/ ">PRIDE Archive


Proteomics DB

Evidence File
/mnt/mpp/ms_data/Q8NEQ6_protdb.txt
Reference
Wilhelm, M et al. (2014) Mass-spectrometry-based draft of the human proteome. Nature. 509:582-7.
https://www.proteomicsdb.org/ ">Proteomics DB